Publications 2013

2013

Amerongen, H. van & Croce, R. (2013). Light harvesting in photosystem II. Photosynthesis Research, 116(2-3), 251-263.

Berera, R., Gwizdala, M.S., Stokkum, I.H.M. van, Kirilovsky, D. & Grondelle, R. van (2013). Excited States of the Inactive and Active Forms of the Orange Carotenoid Protein. Journal of Physical Chemistry B, 117, 9121-9128.

Chmeliov, J., Valkunas, L., Kruger, T.P.J., Ilioaia, C. & Grondelle, R. van (2013). Fluorescence blinking of single major light-harvesting complexes. New Journal of Physics, 15.

J.R. Clem, R. Prozorov, and R.J. Wijngaarden (2013). Equilibrium intermediate-state patterns in a type-I superconducting slab in an arbitrarily oriented applied magnetic field. Phys. Rev. B 88 104504

Croce, R. & Amerongen, H. van (2013). Light-harvesting in photosystem I. Photosynthesis Research, 116(2-3), 153-166.

Curutchet, Carles, Novoderezhkin, Vladimir I., Kongsted, Jacob, Munoz-Losa, Aurora, van Grondelle, Rienk, Scholes, Gregory D., Mennucci, Benedetta Energy Flow in the Cryptophyte PE545 Antenna Is Directed by Bilin Pigment Conformation (2013) JOURNAL OF PHYSICAL CHEMISTRY B, (16) 4263-4273

Kennis, J.T.M. & Mathes, T. (2013). Molecular eyes: proteins that transform light into biological information. Interface Focus, 3(5).

Kennis, J.T.M., Stokkum, I.H.M. van, Peterson, D.S., Pandit, A. & Wachter, R.M. (2013). Ultrafast Proton Shuttling in Psammocora Cyan Fluorescent Protein. Journal of Physical Chemistry B, 117, 11134-11143.

Kouril, R., Wientjes, I.E., Bultema, J.B., Croce, R. & Boekema, E.J. (2013). High-light vs. low-light: Effect of light acclimation on photosystem II composition and organization in Arabidopsis thaliana. Biochimica et Biophysica Acta. Bioenergetics, 1827, 411-419.

Kruger, T.P.J., Ilioaia, C., Johnson, M.P., Ruban, A.V., Papagiannakis, E., Horton, P. & Grondelle, R. van (2012). Controlled Disorder in Plant Light-Harvesting Complex II Explains Its Photoprotective Role. Biophysical Journal, 102, 269-276.

Kruger, T.P.J., Ilioaia, C., Valkunas, L. & Grondelle, R. van (2012). Fluorescence Intermittency from the Main Plant Light-Harvesting Complex: Sensitivity to the Local Environment. Journal of Physical Chemistry B, 116(47), 13939-13939.

Kruger, T.P.J., Ilioaia, C , Johnson, MP , Belgio, E , Horton, P, Ruban, AV, van Grondelle, R The Specificity of Controlled Protein Disorder in the Photoprotection of Plants ](2013) BIOPHYSICAL JOURNAL105, (4)1018-1026

Lambrev, P.H., Miloslavina, Y., Stahl, A.D., Michalik, M, Susz, A., Tworzydlo, J., Fiedor, J., Huhn, G, Groot, M.L., Grondelle, R. van, Garab, G. & Fiedor, L. (2013). Excitation Energy Trapping and Dissipation by Ni-Substituted Bacteriochlorophyll a in Reconstituted LH1 Complexes from Rhodospirillum rubrum. Journal of Physical Chemistry B, 117(38), 11260-11271.

Liguori, N., Roy, L.M., Opacic, M., Durand, G. & Croce, R. (2013). Regulation of Light Harvesting in the Green Alga Chlamydomonas reinhardtii: The C-Terminus of LHCSR Is the Knob of a Dimmer Switch. Journal of the American Chemical Society, 135(49), 18339-18342.

Ly, H.K., Harnisch, F., Hong, S.F., Schroeder, U., Hildebrandt, P. & Millo, D. (2013). Unraveling the Interfacial Electron Transfer Dynamics of Electroactive Microbial Biofilms Using Surface-Enhanced Raman Spectroscopy. ChemSusChem, 6(3), 487-492.

Maiuri, M., Snellenburg, J.J., Stokkum, I.H.M. van, Pillai, S., Carter, K.W., Gust, D., Moore, T.A., Moore, A.L. & Grondelle, R. van (2013). Ultrafast Energy Transfer and Excited State Coupling in an Artificial Photosynthetic Antenna. Journal of Physical Chemistry B, 117(46), 14183-14190.

Mehlhorn, J., Steinocher, H., Beck, S., Kennis, J.T.M., Hegemann, P. & Mathes, T. (2013). A Set of Engineered Escherichia coli Expression Strains for Selective Isotope and Reactivity Labeling of Amino Acid Side Chains and Flavin Cofactors. PLoS One, 8(11).

Nieder, J.B., Stojkovic, E.A, Moffat, K., Forest, K.T., Lamparter, T., Bittl, R. & Kennis, J.T.M. (2013). Pigment-Protein Interactions in Phytochromes Probed by Fluorescence Line Narrowing Spectroscopy. Journal of Physical Chemistry B, 117(48), 14940-14950.

Novoderezhkin, V. & Grondelle, R. van (2013). Spectra and Dynamics in the B800 Antenna: Comparing Hierarchical Equations, Redfield and Forster Theories. Journal of Physical Chemistry B, 117(38), 11076-11090.

Pillai, S., Ravensbergen, J., Antoniuk-Pablant, A., Sherman, B.D., Grondelle, R. van, Frese, R.N., Moore, T.A., Gust, D., Moore, A.L. & Kennis, J.T.M. (2013). Carotenoids as electron or excited-state energy donors in artificial photosynthesis: an ultrafast investigation of a carotenoporphyrin and a carotenofullerene dyad. Physical Chemistry Chemical Physics - PCCP, 15(13), 4775-4784.

Puetz, S.L., Meraz, J., Varela, A., Igova, B., Baker, A., Schirmer, A., Stojkovic, E.A & Kennis, J.T.M. (2013). Structure-based engineering of an infrared fluorescent protein marker. FASEB Journal, 27(576.4).

Snellenburg, J.J., Dekker, J.P., Grondelle, R. van & Stokkum, I.H.M. van (2013). Functional Compartmental Modeling of the Photosystems in the Thylakoid Membrane at 77 K. Journal of Physical Chemistry B, 117(38), 11363-11371.

Stahl, A.D., Di Donato, M., Stokkum, I.H.M. van, Grondelle, R. van & Groot, M.L. (2013). Closed Reaction Centers of PS1 Still Can Perform the First Steps of Charge Separation. A Mid IR Pump Probe Study with fs Resolution. In Photosynthesis Research for Food, Fuel and the Future (pp. 127-130). Springer Berlin Heidelberg.

Stokkum, I.H.M. van, Desquilbet, T.E., Weij - de Wit, C.D. van der, Snellenburg, J.J., Grondelle, R. van, Thomas, J-C., Dekker, J.P. & Robert, B.H. (2013). Energy Transfer and Trapping in Red-Chlorophyll-Free Photosystem I from Synechococcus WH 7803. Journal of Physical Chemistry B, 117(38), 11176-11183.

Tian, L., Stokkum, I.H.M. van, Koehorst, R.B.M. & Amerongen, H. van (2013). Light Harvesting and Blue-Green Light Induced Non-Photochemical Quenching in Two Different C-Phycocyanin Mutants of Synechocystis PCC 6803. Journal of Physical Chemistry B, 117, 11000-11006.

Utesch, T., Millo, D., Castro, M.A., Hildebrandt, P., Zebger, I. & Mroginski, M.A. (2013). Effect of the Protonation Degree of a Self-Assembled Monolayer on the Immobilization Dynamics of a [NiFe] Hydrogenase. Langmuir, 29(2), 673-682.

Valkunas, L., Chmeliov, J., Kruger, T.P.J., Ilioaia, C. & Grondelle, R. van (2012). How Photosynthetic Proteins Switch. Journal of Physical Chemistry Letters, 3(19), 2779-2784.

Vengris, M., Larsen, D.S., Valkunas, L., Kodis, G., Herrero, C., Gust, D., Moore, T.A., Moore, A.L. & Grondelle, R. van (2013). Separating Annihilation and Excitation Energy Transfer Dynamics in Light Harvesting Systems. Journal of Physical Chemistry B, 117(38), 11372-11382.

Wahadoszamen, M.D., Berera, R., Ara, A.M., Romero Mesa, E. & Grondelle, R. van (2012). Identification of two emitting sites in the dissipative state of the major light harvesting antenna. Physical Chemistry Chemical Physics - PCCP, 14(2), 759-766.

Wientjes, I.E., Drop, B.A., Kouril, R., Boekema, E.J. & Croce, R. (2013). During State 1 to State 2 Transition in Arabidopsis thaliana, the Photosystem II Supercomplex Gets Phosphorylated but Does Not Disassemble. Journal of Biological Chemistry, 288(46), 32821-32826.

Wientjes, I.E., Amerongen, H. van & Croce, R. (2013). LHCII is an antenna of both photosystems in all light conditions. Biochimica et Biophysica Acta. Bioenergetics, 1827, 420-426.

Wientjes, I.E., Kouril, R., Boekema, E.J. & Croce, R. (2013). Photosystem II supercomplex organization does not change during state transitions in higher plant. In Photosystem II supercomplex organization does not change during state transitions in higher plant.

Zhu, J., Stokkum, I.H.M. van, Paparelli, L., Jones, M.R. & Groot, M.L. (2013). Early Bacteriopheophytin Reduction in Charge Separation in Reaction Centers of Rhodobacter sphaeroides. Biophysical Journal, 104(11), 2493-2502.

Zhu, J., Hospes, M., Arents, J., Kennis, J.T.M., Stokkum, I.H.M. van, Hellingwerf, K.J. & Groot, M.L. (2013). Photoionization and Electron Radical Recombination Dynamics in Photoactive Yellow Protein Investigated by Ultrafast Spectroscopy in the Visible and Near-Infrared Spectral Region. Journal of Physical Chemistry B, 117(38), 11042-11048.